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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6009130 chr22:49414658 C/T RBX1 chr22:41347351-41369313:+ -0.55 -8.45 3.46E-16 Box Plot
THCA rs6009130 chr22:49414658 C/T RHBDD3 chr22:29655841-29664198:- -0.62 -7.95 1.32E-14 Box Plot
THCA rs6009130 chr22:49414658 C/T RNF185 chr22:31556169-31603005:+ -0.68 -7.25 1.73E-12 Box Plot
THCA rs6009130 chr22:49414658 C/T RNF215 chr22:30764800-30817760:- -0.69 -8.23 1.77E-15 Box Plot
THCA rs6009130 chr22:49414658 C/T RPL3 chr22:39708887-39716394:- -0.62 -6.97 1.06E-11 Box Plot
THCA rs6009130 chr22:49414658 C/T RPS19BP1 chr22:39925098-39928860:- -0.56 -8.6 1.11E-16 Box Plot
THCA rs6009130 chr22:49414658 C/T SAMM50 chr22:44351301-44406411:+ -0.63 -7.41 5.8E-13 Box Plot
THCA rs6009130 chr22:49414658 C/T SAPS2 chr22:50781760-50883514:+ -0.68 -6.96 1.14E-11 Box Plot
THCA rs6009130 chr22:49414658 C/T SCO2 chr22:50961997-50964868:- -0.46 -7.38 7.15E-13 Box Plot
THCA rs6009130 chr22:49414658 C/T SELO chr22:50639408-50656045:+ -0.6 -8.59 1.2E-16 Box Plot
THCA rs6009130 chr22:49414658 C/T SGSM3 chr22:40766595-40806293:+ -0.52 -6.97 1.09E-11 Box Plot
THCA rs6009130 chr22:49414658 C/T SLC25A17 chr22:41165634-41215403:- -0.7 -7.85 2.73E-14 Box Plot
THCA rs6009130 chr22:49414658 C/T SMCR7L chr22:39896105-39914136:+ -0.67 -8.45 3.44E-16 Box Plot
THCA rs6009130 chr22:49414658 C/T SNAP29 chr22:21213271-21245506:+ -0.87 -7.99 9.86E-15 Box Plot
THCA rs6009130 chr22:49414658 C/T SNRPD3 chr22:24951471-25005947:+ -0.54 -6.47 2.47E-10 Box Plot